STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP61421.1ABC-2 type transport system permease protein. (664 aa)    
Predicted Functional Partners:
SFP61446.1
ABC-2 type transport system ATP-binding protein.
 
     0.953
SFP61471.1
GntR family transcriptional regulator.
 
    0.938
SFP49323.1
ABC-2 type transport system permease protein.
  
 
 0.668
SFQ39149.1
ABC-2 type transport system permease protein.
  
 
 0.623
SFO90218.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.535
SFQ24137.1
O-antigen ligase.
  
     0.487
SFP61501.1
Hypothetical protein.
       0.447
SFO90513.1
S-layer homology domain-containing protein.
  
     0.426
SFP61388.1
MFS transporter, NNP family, nitrate/nitrite transporter.
       0.417
Your Current Organism:
Salibacterium halotolerans
NCBI taxonomy Id: 1884432
Other names: Bacillus sp. IB5, Bacillus sp. S7(2015), CGMCC 1.15324, KCTC 33658, S. halotolerans, Salibacterium halotolerans Reddy et al. 2015, strain S7
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