STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ36234.1Chain length determinant protein. (286 aa)    
Predicted Functional Partners:
SFQ36212.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
 
 
 0.988
SFQ36009.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
  
 
 0.961
SFQ19021.1
ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 0.940
SFQ36257.1
O-antigen ligase.
 
  
 0.910
SFQ31667.1
UDP-GlcNAc3NAcA epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
    
 0.808
SFQ36147.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
  
 0.796
SFQ17546.1
Serine O-acetyltransferase.
  
 
 0.770
SFQ25594.1
AraC-type DNA-binding protein.
 
 0.698
SFQ36170.1
UDP-N-acetyl-D-glucosamine dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 
 0.662
SFQ36127.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
 0.658
Your Current Organism:
Salibacterium halotolerans
NCBI taxonomy Id: 1884432
Other names: Bacillus sp. IB5, Bacillus sp. S7(2015), CGMCC 1.15324, KCTC 33658, S. halotolerans, Salibacterium halotolerans Reddy et al. 2015, strain S7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.