STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ39115.1ABC-2 type transport system ATP-binding protein. (314 aa)    
Predicted Functional Partners:
SFQ39149.1
ABC-2 type transport system permease protein.
 
     0.883
SFQ39132.1
ABC-2 type transport system ATP-binding protein.
 
     0.853
SFQ39094.1
Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.
 
     0.705
SFO97308.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
 0.672
SFQ16118.1
Sensor histidine kinase YesM.
 
 
 0.658
SFQ35144.1
Two-component system, sensor histidine kinase YesM.
 
 
 0.641
SFP33952.1
Two-component system, sensor histidine kinase YesM.
 
 
 0.619
SFP67012.1
Sensor histidine kinase YesM.
 
 
 0.613
SFP93306.1
PAS domain S-box-containing protein.
    
 0.571
SFP49021.1
Signal transduction histidine kinase.
  
   
 0.562
Your Current Organism:
Salibacterium halotolerans
NCBI taxonomy Id: 1884432
Other names: Bacillus sp. IB5, Bacillus sp. S7(2015), CGMCC 1.15324, KCTC 33658, S. halotolerans, Salibacterium halotolerans Reddy et al. 2015, strain S7
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