STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW08_017746Uncharacterized protein. (1112 aa)    
Predicted Functional Partners:
EGW08_012949
LisH domain-containing protein.
    
 0.875
EGW08_006119
Uncharacterized protein.
   
 0.841
EGW08_006124
Uncharacterized protein.
   
 0.841
EGW08_006120
CEP209_CC5 domain-containing protein.
   
 0.841
EGW08_006118
Uncharacterized protein.
   
 0.841
EGW08_000100
PACT_coil_coil domain-containing protein.
   
 0.802
EGW08_006490
Uncharacterized protein.
     
 0.799
EGW08_012957
POLO box domain-containing protein.
    
 0.777
EGW08_012958
Uncharacterized protein.
    
 0.777
EGW08_001413
Uncharacterized protein.
   
 0.759
Your Current Organism:
Elysia chlorotica
NCBI taxonomy Id: 188477
Other names: E. chlorotica, eastern emerald elysia, emerald elysia
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