STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW08_011685Uncharacterized protein. (743 aa)    
Predicted Functional Partners:
EGW08_012414
Macro domain-containing protein; Belongs to the histone H2A family.
    
 
 0.653
FEN1
Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]
   
 0.646
EGW08_015270
Uncharacterized protein.
    
  0.631
EGW08_017365
Uncharacterized protein.
    
 0.580
EGW08_016704
OTU domain-containing protein.
    
 0.580
EGW08_017368
Uncharacterized protein.
    
 0.580
EGW08_017364
Uncharacterized protein.
    
 0.580
EGW08_021959
Uncharacterized protein.
    
 0.580
EGW08_018254
Uncharacterized protein.
    
 0.580
EGW08_017369
Uncharacterized protein.
    
 0.580
Your Current Organism:
Elysia chlorotica
NCBI taxonomy Id: 188477
Other names: E. chlorotica, eastern emerald elysia, emerald elysia
Server load: low (14%) [HD]