STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW08_011485Uncharacterized protein. (309 aa)    
Predicted Functional Partners:
EGW08_001587
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
   
 
 0.905
EGW08_004947
Uncharacterized protein.
   
 
 0.876
EGW08_022340
COMM domain-containing protein.
    
 
 0.828
EGW08_022944
COMM domain-containing protein.
    
 
 0.819
EGW08_008959
COMM domain-containing protein.
    
 
 0.819
EGW08_022322
COMM domain-containing protein.
    
 
 0.812
EGW08_003807
Uncharacterized protein.
   
 
 0.810
EGW08_012524
COMM domain-containing protein.
    
 
 0.789
EGW08_022401
UDENN domain-containing protein.
    
 
 0.736
EGW08_016970
Uncharacterized protein.
    
 
 0.731
Your Current Organism:
Elysia chlorotica
NCBI taxonomy Id: 188477
Other names: E. chlorotica, eastern emerald elysia, emerald elysia
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