STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW08_018636Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. (418 aa)    
Predicted Functional Partners:
EGW08_011442
Uncharacterized protein.
    
 0.999
EGW08_020685
Uncharacterized protein.
    
 0.991
EGW08_010435
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
     
 0.989
EGW08_005876
Alkyl transferase; Belongs to the UPP synthase family.
     
 0.986
EGW08_006730
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
   
 0.984
EGW08_019113
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
   
 0.983
EGW08_006058
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
   
 0.979
EGW08_016557
Uncharacterized protein.
     
 0.978
EGW08_015461
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
   
 0.966
EGW08_010894
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
   
 0.966
Your Current Organism:
Elysia chlorotica
NCBI taxonomy Id: 188477
Other names: E. chlorotica, eastern emerald elysia, emerald elysia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.