EGW08_000219 protein (Elysia chlorotica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EGW08_000219

ANK_REP_REGION domain-containing protein. (904 aa)

Predicted Functional Partners:

EGW08_018152

0.645

EGW08_019166

0.600

EGW08_019950

0.564

EGW08_018087

0.564

EGW08_002755

0.564

EGW08_004410

0.549

EGW08_007131

0.485

EGW08_001982

0.485

EGW08_011002

0.485

EGW08_011144

0.485

Your Current Organism:

Elysia chlorotica

NCBI taxonomy Id: 188477
Other names: E. chlorotica, eastern emerald elysia, emerald elysia

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EGW08_000219	EGW08_001982	A0A3S1BV91	A0A3S1A023	ANK_REP_REGION domain-containing protein.	Mothers against decapentaplegic homolog.	0.485
EGW08_000219	EGW08_002755	A0A3S1BV91	A0A433U6Z3	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.564
EGW08_000219	EGW08_004410	A0A3S1BV91	A0A433U1W7	ANK_REP_REGION domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.549
EGW08_000219	EGW08_007131	A0A3S1BV91	A0A3S0ZX08	ANK_REP_REGION domain-containing protein.	Mothers against decapentaplegic homolog.	0.485
EGW08_000219	EGW08_011002	A0A3S1BV91	A0A3S1B6X8	ANK_REP_REGION domain-containing protein.	MH2 domain-containing protein.	0.485
EGW08_000219	EGW08_011144	A0A3S1BV91	A0A3S1BDL1	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.485
EGW08_000219	EGW08_018087	A0A3S1BV91	A0A433SXZ7	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.564
EGW08_000219	EGW08_018152	A0A3S1BV91	A0A3S0ZSD3	ANK_REP_REGION domain-containing protein.	Uncharacterized protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.645
EGW08_000219	EGW08_019166	A0A3S1BV91	A0A433SV10	ANK_REP_REGION domain-containing protein.	SAM domain-containing protein.	0.600
EGW08_000219	EGW08_019950	A0A3S1BV91	A0A433SSU1	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.564
EGW08_001982	EGW08_000219	A0A3S1A023	A0A3S1BV91	Mothers against decapentaplegic homolog.	ANK_REP_REGION domain-containing protein.	0.485
EGW08_001982	EGW08_007131	A0A3S1A023	A0A3S0ZX08	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.981
EGW08_002755	EGW08_000219	A0A433U6Z3	A0A3S1BV91	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.564
EGW08_002755	EGW08_004410	A0A433U6Z3	A0A433U1W7	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.693
EGW08_002755	EGW08_018152	A0A433U6Z3	A0A3S0ZSD3	Uncharacterized protein.	Uncharacterized protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.767
EGW08_004410	EGW08_000219	A0A433U1W7	A0A3S1BV91	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	ANK_REP_REGION domain-containing protein.	0.549
EGW08_004410	EGW08_002755	A0A433U1W7	A0A433U6Z3	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Uncharacterized protein.	0.693
EGW08_004410	EGW08_018087	A0A433U1W7	A0A433SXZ7	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Uncharacterized protein.	0.693
EGW08_004410	EGW08_019950	A0A433U1W7	A0A433SSU1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Uncharacterized protein.	0.693
EGW08_007131	EGW08_000219	A0A3S0ZX08	A0A3S1BV91	Mothers against decapentaplegic homolog.	ANK_REP_REGION domain-containing protein.	0.485