STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW08_006231Uncharacterized protein. (208 aa)    
Predicted Functional Partners:
EGW08_015052
Uncharacterized protein.
   
 0.996
EGW08_009074
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.996
EGW08_007299
SGF29 C-terminal domain-containing protein.
    
 0.996
EGW08_006286
TFIID_20kDa domain-containing protein.
    
 0.996
EGW08_021528
Uncharacterized protein.
    
 0.993
EGW08_000479
Uncharacterized protein.
    
 
 0.990
EGW08_015957
TAF domain-containing protein.
    
 0.989
EGW08_019529
Ubiquitin carboxyl-terminal hydrolase.
    
 0.982
EGW08_014171
BTP domain-containing protein.
    
 0.975
EGW08_007971
TAF6_C domain-containing protein.
    
 0.974
Your Current Organism:
Elysia chlorotica
NCBI taxonomy Id: 188477
Other names: E. chlorotica, eastern emerald elysia, emerald elysia
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