STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW08_023686Uncharacterized protein. (1438 aa)    
Predicted Functional Partners:
EGW08_007474
ERCC4 domain-containing protein.
    
  0.601
EGW08_007472
Uncharacterized protein.
    
  0.601
EGW08_007473
Uncharacterized protein.
    
  0.601
EGW08_019008
Uncharacterized protein.
    
 0.454
EGW08_006674
WD_REPEATS_REGION domain-containing protein.
    
 0.453
EGW08_002372
CRC domain-containing protein.
    
 0.451
EGW08_016806
CENP-T_C domain-containing protein.
    
  0.426
EGW08_017739
DIRP domain-containing protein.
    
 0.412
EGW08_017098
RPA_C domain-containing protein.
    
 0.400
Your Current Organism:
Elysia chlorotica
NCBI taxonomy Id: 188477
Other names: E. chlorotica, eastern emerald elysia, emerald elysia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.