STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW08_019821PseudoU_synth_1 domain-containing protein. (818 aa)    
Predicted Functional Partners:
EGW08_012122
Uncharacterized protein.
   
    0.846
EGW08_013424
PUA domain-containing protein.
   
 0.826
EGW08_010407
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
   
 
 0.809
EGW08_018119
TruB_N domain-containing protein.
   
 0.807
EGW08_000508
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.
   
 
 0.756
EGW08_015572
Uncharacterized protein.
   
    0.753
EGW08_016036
Uncharacterized protein.
  
  
 0.751
EGW08_006655
SAM-dependent MTase TRM10-type domain-containing protein.
   
 
 0.746
EGW08_012919
Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.
   
 
 0.727
EGW08_013818
Brix domain-containing protein.
   
    0.727
Your Current Organism:
Elysia chlorotica
NCBI taxonomy Id: 188477
Other names: E. chlorotica, eastern emerald elysia, emerald elysia
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