STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW08_013851DUF2428 domain-containing protein. (2015 aa)    
Predicted Functional Partners:
EGW08_000508
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.
   
 
 0.930
EGW08_009862
Spb1_C domain-containing protein.
   
 
 0.565
EGW08_009863
Uncharacterized protein.
   
 
 0.565
EGW08_005403
UPF0020 domain-containing protein.
   
  
 0.555
EGW08_023043
FtsJ domain-containing protein.
   
 
 0.543
EGW08_000924
FtsJ domain-containing protein.
   
 
 0.543
EGW08_010407
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
   
  
 0.526
EGW08_010543
Uncharacterized protein.
   
  
 0.503
EGW08_010259
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.
   
  
 0.500
EGW08_017098
RPA_C domain-containing protein.
    
   0.474
Your Current Organism:
Elysia chlorotica
NCBI taxonomy Id: 188477
Other names: E. chlorotica, eastern emerald elysia, emerald elysia
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