STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW08_001422Uncharacterized protein. (239 aa)    
Predicted Functional Partners:
EGW08_019458
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.609
EGW08_013347
Uncharacterized protein.
   
   0.554
EGW08_020423
Uncharacterized protein.
    
 0.514
EGW08_015188
Uncharacterized protein.
    
 0.491
EGW08_001611
Uncharacterized protein.
   
   0.483
EGW08_018058
Ubiquitin-like domain-containing protein.
    
  0.463
EGW08_003389
Uncharacterized protein.
    
  0.460
EGW08_006948
Ribosomal_L2_C domain-containing protein.
   
 
 0.456
EGW08_015792
Ribosomal_L2_C domain-containing protein.
   
 
 0.453
EGW08_006770
Ubiquitin-like domain-containing protein.
    
  0.450
Your Current Organism:
Elysia chlorotica
NCBI taxonomy Id: 188477
Other names: E. chlorotica, eastern emerald elysia, emerald elysia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.