STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGK57955.1Lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)    
Predicted Functional Partners:
KGK57956.1
3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.910
KGK57954.1
NAD(P)H steroid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.882
KGK57951.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.855
KGK57953.1
Ceramide glucosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.817
KGK57952.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.784
KGK57407.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.773
KGK58079.1
Molybdopterin biosynthesis protein MoeB; ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.765
KGK58243.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 
 0.697
KGK58174.1
Glutaredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.682
KGK57957.1
Polysaccharide biosynthesis protein GumN; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.663
Your Current Organism:
Xanthomonas cannabis
NCBI taxonomy Id: 1885902
Other names: X. cannabis pv. phaseoli, Xanthomonas cannabis pv. phaseoli, Xanthomonas sp. Nyagatare
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.