STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODP30057.1Hypothetical protein. (605 aa)    
Predicted Functional Partners:
ODP28747.1
Hypothetical protein.
 
  
 0.883
ODP28748.1
Hypothetical protein.
 
  
 0.873
ODP30056.1
Hypothetical protein.
       0.789
ODP30058.1
Hypothetical protein.
       0.789
ODP30059.1
Hypothetical protein.
       0.789
ODP30060.1
Hypothetical protein.
  
  
 0.778
ODP30577.1
Hypothetical protein.
 
     0.777
ODP30061.1
Non-specific serine/threonine protein kinase; MEKK1, MKK1/MKK2 and MPK4/MPK6 function in a signaling pathway that modulates the expression of genes responding to biotic and abiotic stresses and also plays an important role in pathogen defense by negatively regulating innate immunity. Activates by phosphorylation the downstream MPK4. Acts redundantly with MKK2. MKK1-MPK6 module mediates abscisic acid (ABA)-dependent CAT1 expression with H(2)O(2) production and response to drought and salt stress. MKK1-MPK6 module is also involved in sugar signaling during the process of seed germination [...]
 
     0.675
ODP28750.1
Hypothetical protein.
 
  
 0.670
cpaA
KEGG: slp:Slip_1924 prepilin peptidase CpaA.
 
   
 0.654
Your Current Organism:
Paenibacillus nuruki
NCBI taxonomy Id: 1886670
Other names: KACC 18728, NBRC 112013, P. nuruki, Paenibacillus sp. TI45-13ar, strain TI45-13ar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.