Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMM06562.1 | AMM06583.1 | Salbus254_0001 | Salbus254_0024 | Hypothetical protein. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.998 |
AMM06562.1 | AMM07066.1 | Salbus254_0001 | Salbus254_0513 | Hypothetical protein. | Histidine kinase. | 0.988 |
AMM06562.1 | AMM07068.1 | Salbus254_0001 | Salbus254_0515 | Hypothetical protein. | Multi-component regulatory system-3. | 0.689 |
AMM06562.1 | AMM07142.1 | Salbus254_0001 | Salbus254_0588 | Hypothetical protein. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.998 |
AMM06562.1 | AMM07906.1 | Salbus254_0001 | Salbus254_1363 | Hypothetical protein. | Two-component system sensor histidine kinase. | 0.999 |
AMM06562.1 | AMM08113.1 | Salbus254_0001 | Salbus254_1583 | Hypothetical protein. | Integral membrane phosphodiesterase. | 0.999 |
AMM06562.1 | AMM08493.1 | Salbus254_0001 | Salbus254_1971 | Hypothetical protein. | Regulatory protein. | 0.998 |
AMM06562.1 | AMM09027.1 | Salbus254_0001 | Salbus254_2518 | Hypothetical protein. | Diguanylate cyclase. | 0.999 |
AMM06562.1 | AMM09171.1 | Salbus254_0001 | Salbus254_2665 | Hypothetical protein. | GGDEF domain-containing protein. | 0.999 |
AMM06583.1 | AMM06562.1 | Salbus254_0024 | Salbus254_0001 | Serine phosphatase RsbU, regulator of sigma subunit. | Hypothetical protein. | 0.998 |
AMM06583.1 | AMM07066.1 | Salbus254_0024 | Salbus254_0513 | Serine phosphatase RsbU, regulator of sigma subunit. | Histidine kinase. | 0.868 |
AMM06583.1 | AMM07142.1 | Salbus254_0024 | Salbus254_0588 | Serine phosphatase RsbU, regulator of sigma subunit. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.972 |
AMM06583.1 | AMM07906.1 | Salbus254_0024 | Salbus254_1363 | Serine phosphatase RsbU, regulator of sigma subunit. | Two-component system sensor histidine kinase. | 0.999 |
AMM06583.1 | AMM08113.1 | Salbus254_0024 | Salbus254_1583 | Serine phosphatase RsbU, regulator of sigma subunit. | Integral membrane phosphodiesterase. | 0.984 |
AMM06583.1 | AMM08493.1 | Salbus254_0024 | Salbus254_1971 | Serine phosphatase RsbU, regulator of sigma subunit. | Regulatory protein. | 0.975 |
AMM06583.1 | AMM09027.1 | Salbus254_0024 | Salbus254_2518 | Serine phosphatase RsbU, regulator of sigma subunit. | Diguanylate cyclase. | 0.919 |
AMM06583.1 | AMM09171.1 | Salbus254_0024 | Salbus254_2665 | Serine phosphatase RsbU, regulator of sigma subunit. | GGDEF domain-containing protein. | 0.960 |
AMM07066.1 | AMM06562.1 | Salbus254_0513 | Salbus254_0001 | Histidine kinase. | Hypothetical protein. | 0.988 |
AMM07066.1 | AMM06583.1 | Salbus254_0513 | Salbus254_0024 | Histidine kinase. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.868 |
AMM07066.1 | AMM07068.1 | Salbus254_0513 | Salbus254_0515 | Histidine kinase. | Multi-component regulatory system-3. | 0.898 |
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