Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMM07157.1 | AMM07158.1 | Salbus254_0603 | Salbus254_0604 | Hypothetical protein. | Transcriptional regulator, MerR family. | 0.921 |
AMM07157.1 | AMM07467.1 | Salbus254_0603 | Salbus254_0914 | Hypothetical protein. | Integral membrane protein. | 0.821 |
AMM07157.1 | AMM07906.1 | Salbus254_0603 | Salbus254_1363 | Hypothetical protein. | Two-component system sensor histidine kinase. | 0.913 |
AMM07157.1 | AMM08759.1 | Salbus254_0603 | Salbus254_2245 | Hypothetical protein. | Hypothetical protein. | 0.821 |
AMM07157.1 | AMM12267.1 | Salbus254_0603 | Salbus254_5839 | Hypothetical protein. | ATP-dependent Clp protease proteolytic subunit. | 0.914 |
AMM07157.1 | clpP | Salbus254_0603 | Salbus254_0494 | Hypothetical protein. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.914 |
AMM07157.1 | clpP-2 | Salbus254_0603 | Salbus254_0495 | Hypothetical protein. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.914 |
AMM07157.1 | clpP-3 | Salbus254_0603 | Salbus254_4560 | Hypothetical protein. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.914 |
AMM07157.1 | clpP-4 | Salbus254_0603 | Salbus254_4561 | Hypothetical protein. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.914 |
AMM07157.1 | lon | Salbus254_0603 | Salbus254_1774 | Hypothetical protein. | ATP-dependent protease La Type I; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. | 0.819 |
AMM07158.1 | AMM07157.1 | Salbus254_0604 | Salbus254_0603 | Transcriptional regulator, MerR family. | Hypothetical protein. | 0.921 |
AMM07158.1 | AMM07906.1 | Salbus254_0604 | Salbus254_1363 | Transcriptional regulator, MerR family. | Two-component system sensor histidine kinase. | 0.939 |
AMM07467.1 | AMM07157.1 | Salbus254_0914 | Salbus254_0603 | Integral membrane protein. | Hypothetical protein. | 0.821 |
AMM07467.1 | AMM07906.1 | Salbus254_0914 | Salbus254_1363 | Integral membrane protein. | Two-component system sensor histidine kinase. | 0.998 |
AMM07467.1 | AMM12267.1 | Salbus254_0914 | Salbus254_5839 | Integral membrane protein. | ATP-dependent Clp protease proteolytic subunit. | 0.795 |
AMM07467.1 | clpP | Salbus254_0914 | Salbus254_0494 | Integral membrane protein. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.795 |
AMM07467.1 | clpP-2 | Salbus254_0914 | Salbus254_0495 | Integral membrane protein. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.795 |
AMM07467.1 | clpP-3 | Salbus254_0914 | Salbus254_4560 | Integral membrane protein. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.795 |
AMM07467.1 | clpP-4 | Salbus254_0914 | Salbus254_4561 | Integral membrane protein. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.795 |
AMM07906.1 | AMM07157.1 | Salbus254_1363 | Salbus254_0603 | Two-component system sensor histidine kinase. | Hypothetical protein. | 0.913 |
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