Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMM08805.1 | AMM08806.1 | Salbus254_2292 | Salbus254_2293 | Biosynthesis docking scaffold protein, SagD family. | Polyamine-transporting ATPase. | 0.693 |
AMM08805.1 | AMM08807.1 | Salbus254_2292 | Salbus254_2294 | Biosynthesis docking scaffold protein, SagD family. | Hypothetical protein. | 0.899 |
AMM08805.1 | AMM08808.1 | Salbus254_2292 | Salbus254_2295 | Biosynthesis docking scaffold protein, SagD family. | Lantibiotic biosynthesis protein. | 0.944 |
AMM08805.1 | AMM08809.1 | Salbus254_2292 | Salbus254_2296 | Biosynthesis docking scaffold protein, SagD family. | Lantibiotic dehydratase domain-containing protein. | 0.910 |
AMM08805.1 | AMM08810.1 | Salbus254_2292 | Salbus254_2297 | Biosynthesis docking scaffold protein, SagD family. | Nitroreductase. | 0.944 |
AMM08805.1 | AMM08812.1 | Salbus254_2292 | Salbus254_2299 | Biosynthesis docking scaffold protein, SagD family. | Transcriptional activator protein. | 0.896 |
AMM08805.1 | AMM08813.1 | Salbus254_2292 | Salbus254_2300 | Biosynthesis docking scaffold protein, SagD family. | AfsR-like transcriptional regulator. | 0.705 |
AMM08805.1 | AMM09549.1 | Salbus254_2292 | Salbus254_3062 | Biosynthesis docking scaffold protein, SagD family. | Integral membrane protein. | 0.594 |
AMM08805.1 | AMM11728.1 | Salbus254_2292 | Salbus254_5281 | Biosynthesis docking scaffold protein, SagD family. | ABC transporter ATP-binding protein. | 0.690 |
AMM08805.1 | cobT-2 | Salbus254_2292 | Salbus254_5564 | Biosynthesis docking scaffold protein, SagD family. | Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). | 0.646 |
AMM08806.1 | AMM08805.1 | Salbus254_2293 | Salbus254_2292 | Polyamine-transporting ATPase. | Biosynthesis docking scaffold protein, SagD family. | 0.693 |
AMM08806.1 | AMM08807.1 | Salbus254_2293 | Salbus254_2294 | Polyamine-transporting ATPase. | Hypothetical protein. | 0.808 |
AMM08806.1 | AMM08808.1 | Salbus254_2293 | Salbus254_2295 | Polyamine-transporting ATPase. | Lantibiotic biosynthesis protein. | 0.824 |
AMM08806.1 | AMM08809.1 | Salbus254_2293 | Salbus254_2296 | Polyamine-transporting ATPase. | Lantibiotic dehydratase domain-containing protein. | 0.829 |
AMM08806.1 | AMM08810.1 | Salbus254_2293 | Salbus254_2297 | Polyamine-transporting ATPase. | Nitroreductase. | 0.814 |
AMM08806.1 | AMM08812.1 | Salbus254_2293 | Salbus254_2299 | Polyamine-transporting ATPase. | Transcriptional activator protein. | 0.774 |
AMM08806.1 | AMM08813.1 | Salbus254_2293 | Salbus254_2300 | Polyamine-transporting ATPase. | AfsR-like transcriptional regulator. | 0.591 |
AMM08806.1 | AMM09549.1 | Salbus254_2293 | Salbus254_3062 | Polyamine-transporting ATPase. | Integral membrane protein. | 0.721 |
AMM08806.1 | AMM11728.1 | Salbus254_2293 | Salbus254_5281 | Polyamine-transporting ATPase. | ABC transporter ATP-binding protein. | 0.584 |
AMM08807.1 | AMM08805.1 | Salbus254_2294 | Salbus254_2292 | Hypothetical protein. | Biosynthesis docking scaffold protein, SagD family. | 0.899 |
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