Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMM07610.1 | AMM08821.1 | Salbus254_1061 | Salbus254_2308 | Phosphoketolase. | Fructose-2, 6-bisphosphatase. | 0.866 |
AMM07610.1 | AMM08823.1 | Salbus254_1061 | Salbus254_2310 | Phosphoketolase. | Fructose-2, 6-bisphosphatase. | 0.866 |
AMM07610.1 | pgi | Salbus254_1061 | Salbus254_5188 | Phosphoketolase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.989 |
AMM07610.1 | tal | Salbus254_1061 | Salbus254_5192 | Phosphoketolase. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. | 0.990 |
AMM08109.1 | AMM08763.1 | Salbus254_1579 | Salbus254_2249 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Cystathionine beta-synthase. | 0.987 |
AMM08109.1 | AMM08821.1 | Salbus254_1579 | Salbus254_2308 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Fructose-2, 6-bisphosphatase. | 0.871 |
AMM08109.1 | AMM08823.1 | Salbus254_1579 | Salbus254_2310 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Fructose-2, 6-bisphosphatase. | 0.871 |
AMM08109.1 | AMM11641.1 | Salbus254_1579 | Salbus254_5193 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.656 |
AMM08109.1 | gpmA | Salbus254_1579 | Salbus254_3582 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 2, 3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.992 |
AMM08109.1 | pgi | Salbus254_1579 | Salbus254_5188 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.573 |
AMM08109.1 | tal | Salbus254_1579 | Salbus254_5192 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. | 0.699 |
AMM08763.1 | AMM08109.1 | Salbus254_2249 | Salbus254_1579 | Cystathionine beta-synthase. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.987 |
AMM08763.1 | AMM08821.1 | Salbus254_2249 | Salbus254_2308 | Cystathionine beta-synthase. | Fructose-2, 6-bisphosphatase. | 0.889 |
AMM08763.1 | AMM08823.1 | Salbus254_2249 | Salbus254_2310 | Cystathionine beta-synthase. | Fructose-2, 6-bisphosphatase. | 0.889 |
AMM08763.1 | gpmA | Salbus254_2249 | Salbus254_3582 | Cystathionine beta-synthase. | 2, 3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.538 |
AMM08763.1 | tal | Salbus254_2249 | Salbus254_5192 | Cystathionine beta-synthase. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. | 0.557 |
AMM08821.1 | AMM07610.1 | Salbus254_2308 | Salbus254_1061 | Fructose-2, 6-bisphosphatase. | Phosphoketolase. | 0.866 |
AMM08821.1 | AMM08109.1 | Salbus254_2308 | Salbus254_1579 | Fructose-2, 6-bisphosphatase. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.871 |
AMM08821.1 | AMM08763.1 | Salbus254_2308 | Salbus254_2249 | Fructose-2, 6-bisphosphatase. | Cystathionine beta-synthase. | 0.889 |
AMM08821.1 | AMM08823.1 | Salbus254_2308 | Salbus254_2310 | Fructose-2, 6-bisphosphatase. | Fructose-2, 6-bisphosphatase. | 0.980 |
page 1 of 4