Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMM06562.1 | AMM06583.1 | Salbus254_0001 | Salbus254_0024 | Hypothetical protein. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.998 |
AMM06562.1 | AMM07906.1 | Salbus254_0001 | Salbus254_1363 | Hypothetical protein. | Two-component system sensor histidine kinase. | 0.999 |
AMM06562.1 | AMM08113.1 | Salbus254_0001 | Salbus254_1583 | Hypothetical protein. | Integral membrane phosphodiesterase. | 0.999 |
AMM06562.1 | AMM08493.1 | Salbus254_0001 | Salbus254_1971 | Hypothetical protein. | Regulatory protein. | 0.998 |
AMM06562.1 | AMM09217.1 | Salbus254_0001 | Salbus254_2712 | Hypothetical protein. | Anti-sigma-factor antagonist. | 0.855 |
AMM06562.1 | AMM09218.1 | Salbus254_0001 | Salbus254_2713 | Hypothetical protein. | Anti-sigma factor antagonist. | 0.855 |
AMM06562.1 | AMM09219.1 | Salbus254_0001 | Salbus254_2714 | Hypothetical protein. | Sigma-B negative effector. | 0.515 |
AMM06562.1 | AMM09221.1 | Salbus254_0001 | Salbus254_2716 | Hypothetical protein. | Two-component system sensor histidine kinase. | 0.999 |
AMM06562.1 | AMM09222.1 | Salbus254_0001 | Salbus254_2717 | Hypothetical protein. | Two component response regulator receiver modulated serine phosphatase RsbU. | 0.998 |
AMM06562.1 | AMM12589.1 | Salbus254_0001 | Salbus254_6160 | Hypothetical protein. | Integral membrane sensor protein. | 0.998 |
AMM06583.1 | AMM06562.1 | Salbus254_0024 | Salbus254_0001 | Serine phosphatase RsbU, regulator of sigma subunit. | Hypothetical protein. | 0.998 |
AMM06583.1 | AMM07906.1 | Salbus254_0024 | Salbus254_1363 | Serine phosphatase RsbU, regulator of sigma subunit. | Two-component system sensor histidine kinase. | 0.999 |
AMM06583.1 | AMM08113.1 | Salbus254_0024 | Salbus254_1583 | Serine phosphatase RsbU, regulator of sigma subunit. | Integral membrane phosphodiesterase. | 0.984 |
AMM06583.1 | AMM08493.1 | Salbus254_0024 | Salbus254_1971 | Serine phosphatase RsbU, regulator of sigma subunit. | Regulatory protein. | 0.975 |
AMM06583.1 | AMM09217.1 | Salbus254_0024 | Salbus254_2712 | Serine phosphatase RsbU, regulator of sigma subunit. | Anti-sigma-factor antagonist. | 0.960 |
AMM06583.1 | AMM09218.1 | Salbus254_0024 | Salbus254_2713 | Serine phosphatase RsbU, regulator of sigma subunit. | Anti-sigma factor antagonist. | 0.960 |
AMM06583.1 | AMM09219.1 | Salbus254_0024 | Salbus254_2714 | Serine phosphatase RsbU, regulator of sigma subunit. | Sigma-B negative effector. | 0.784 |
AMM06583.1 | AMM09221.1 | Salbus254_0024 | Salbus254_2716 | Serine phosphatase RsbU, regulator of sigma subunit. | Two-component system sensor histidine kinase. | 0.987 |
AMM06583.1 | AMM09222.1 | Salbus254_0024 | Salbus254_2717 | Serine phosphatase RsbU, regulator of sigma subunit. | Two component response regulator receiver modulated serine phosphatase RsbU. | 0.977 |
AMM06583.1 | AMM12589.1 | Salbus254_0024 | Salbus254_6160 | Serine phosphatase RsbU, regulator of sigma subunit. | Integral membrane sensor protein. | 0.976 |
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