Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMM07106.1 | AMM10364.1 | Salbus254_0553 | Salbus254_3898 | Cytosine deaminase. | Hydrolase. | 0.988 |
AMM07106.1 | AMM10661.1 | Salbus254_0553 | Salbus254_4199 | Cytosine deaminase. | Thymidine phosphorylase. | 0.985 |
AMM07106.1 | AMM10694.1 | Salbus254_0553 | Salbus254_4232 | Cytosine deaminase. | Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.985 |
AMM07106.1 | tadA | Salbus254_0553 | Salbus254_3096 | Cytosine deaminase. | Deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.865 |
AMM07106.1 | upp | Salbus254_0553 | Salbus254_3093 | Cytosine deaminase. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.985 |
AMM10364.1 | AMM07106.1 | Salbus254_3898 | Salbus254_0553 | Hydrolase. | Cytosine deaminase. | 0.988 |
AMM10364.1 | AMM10661.1 | Salbus254_3898 | Salbus254_4199 | Hydrolase. | Thymidine phosphorylase. | 0.985 |
AMM10364.1 | AMM10694.1 | Salbus254_3898 | Salbus254_4232 | Hydrolase. | Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.985 |
AMM10364.1 | tadA | Salbus254_3898 | Salbus254_3096 | Hydrolase. | Deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.865 |
AMM10364.1 | upp | Salbus254_3898 | Salbus254_3093 | Hydrolase. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.985 |
AMM10661.1 | AMM07106.1 | Salbus254_4199 | Salbus254_0553 | Thymidine phosphorylase. | Cytosine deaminase. | 0.985 |
AMM10661.1 | AMM10364.1 | Salbus254_4199 | Salbus254_3898 | Thymidine phosphorylase. | Hydrolase. | 0.985 |
AMM10661.1 | AMM10686.1 | Salbus254_4199 | Salbus254_4224 | Thymidine phosphorylase. | ATP-binding protein. | 0.799 |
AMM10661.1 | AMM10694.1 | Salbus254_4199 | Salbus254_4232 | Thymidine phosphorylase. | Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.996 |
AMM10661.1 | AMM12432.1 | Salbus254_4199 | Salbus254_6003 | Thymidine phosphorylase. | Indigoidine synthesis protein IdgA. | 0.988 |
AMM10661.1 | upp | Salbus254_4199 | Salbus254_3093 | Thymidine phosphorylase. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.994 |
AMM10686.1 | AMM10661.1 | Salbus254_4224 | Salbus254_4199 | ATP-binding protein. | Thymidine phosphorylase. | 0.799 |
AMM10686.1 | AMM10694.1 | Salbus254_4224 | Salbus254_4232 | ATP-binding protein. | Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.884 |
AMM10686.1 | AMM12074.1 | Salbus254_4224 | Salbus254_5640 | ATP-binding protein. | Orotidine 5'-phosphate decarboxylase. | 0.992 |
AMM10686.1 | pyrH | Salbus254_4224 | Salbus254_1449 | ATP-binding protein. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.985 |
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