Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMM06562.1 | AMM07906.1 | Salbus254_0001 | Salbus254_1363 | Hypothetical protein. | Two-component system sensor histidine kinase. | 0.999 |
AMM06562.1 | AMM12157.1 | Salbus254_0001 | Salbus254_5726 | Hypothetical protein. | Mannose-1-phosphate guanyltransferase. | 0.713 |
AMM06562.1 | AMM12667.1 | Salbus254_0001 | Salbus254_6247 | Hypothetical protein. | Type I polyketide synthase. | 0.808 |
AMM06562.1 | AMM12729.1 | Salbus254_0001 | Salbus254_6319 | Hypothetical protein. | Polyketide synthase. | 0.976 |
AMM06562.1 | AMM12732.1 | Salbus254_0001 | Salbus254_6322 | Hypothetical protein. | Aminotransferase. | 0.984 |
AMM06562.1 | nadE | Salbus254_0001 | Salbus254_4888 | Hypothetical protein. | NAD(+) synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.725 |
AMM06562.1 | nudF | Salbus254_0001 | Salbus254_3324 | Hypothetical protein. | ADP-ribose pyrophosphatase. | 0.961 |
AMM06562.1 | pyrG | Salbus254_0001 | Salbus254_5314 | Hypothetical protein. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.400 |
AMM06562.1 | ribBA | Salbus254_0001 | Salbus254_5678 | Hypothetical protein. | 3, 4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.999 |
AMM07906.1 | AMM06562.1 | Salbus254_1363 | Salbus254_0001 | Two-component system sensor histidine kinase. | Hypothetical protein. | 0.999 |
AMM07906.1 | AMM10693.1 | Salbus254_1363 | Salbus254_4231 | Two-component system sensor histidine kinase. | Phosphomannomutase. | 0.464 |
AMM07906.1 | AMM12157.1 | Salbus254_1363 | Salbus254_5726 | Two-component system sensor histidine kinase. | Mannose-1-phosphate guanyltransferase. | 0.857 |
AMM07906.1 | AMM12667.1 | Salbus254_1363 | Salbus254_6247 | Two-component system sensor histidine kinase. | Type I polyketide synthase. | 0.936 |
AMM07906.1 | AMM12729.1 | Salbus254_1363 | Salbus254_6319 | Two-component system sensor histidine kinase. | Polyketide synthase. | 0.996 |
AMM07906.1 | AMM12732.1 | Salbus254_1363 | Salbus254_6322 | Two-component system sensor histidine kinase. | Aminotransferase. | 0.990 |
AMM07906.1 | nadE | Salbus254_1363 | Salbus254_4888 | Two-component system sensor histidine kinase. | NAD(+) synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.857 |
AMM07906.1 | nudF | Salbus254_1363 | Salbus254_3324 | Two-component system sensor histidine kinase. | ADP-ribose pyrophosphatase. | 0.976 |
AMM07906.1 | pyrG | Salbus254_1363 | Salbus254_5314 | Two-component system sensor histidine kinase. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.400 |
AMM07906.1 | ribBA | Salbus254_1363 | Salbus254_5678 | Two-component system sensor histidine kinase. | 3, 4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.999 |
AMM10693.1 | AMM07906.1 | Salbus254_4231 | Salbus254_1363 | Phosphomannomutase. | Two-component system sensor histidine kinase. | 0.464 |
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