Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMM06562.1 | AMM07906.1 | Salbus254_0001 | Salbus254_1363 | Hypothetical protein. | Two-component system sensor histidine kinase. | 0.999 |
AMM06562.1 | AMM07991.1 | Salbus254_0001 | Salbus254_1455 | Hypothetical protein. | DNA processing Smf-family protein. | 0.401 |
AMM06562.1 | AMM09407.1 | Salbus254_0001 | Salbus254_2907 | Hypothetical protein. | Thymidylate kinase. | 0.682 |
AMM06562.1 | AMM10284.1 | Salbus254_0001 | Salbus254_3816 | Hypothetical protein. | Type IV peptidase. | 0.763 |
AMM06562.1 | AMM11064.1 | Salbus254_0001 | Salbus254_4608 | Hypothetical protein. | N-hydroxyarylamine O-acetyltransferase. | 0.634 |
AMM06562.1 | AMM12163.1 | Salbus254_0001 | Salbus254_5732 | Hypothetical protein. | MerR family regulatory protein. | 0.707 |
AMM06562.1 | coaE | Salbus254_0001 | Salbus254_5151 | Hypothetical protein. | Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.400 |
AMM06562.1 | mqnC | Salbus254_0001 | Salbus254_3818 | Hypothetical protein. | Menaquinone biosynthetic enzyme; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2). | 0.595 |
AMM07906.1 | AMM06562.1 | Salbus254_1363 | Salbus254_0001 | Two-component system sensor histidine kinase. | Hypothetical protein. | 0.999 |
AMM07906.1 | AMM07991.1 | Salbus254_1363 | Salbus254_1455 | Two-component system sensor histidine kinase. | DNA processing Smf-family protein. | 0.572 |
AMM07906.1 | AMM09407.1 | Salbus254_1363 | Salbus254_2907 | Two-component system sensor histidine kinase. | Thymidylate kinase. | 0.682 |
AMM07906.1 | AMM10284.1 | Salbus254_1363 | Salbus254_3816 | Two-component system sensor histidine kinase. | Type IV peptidase. | 0.857 |
AMM07906.1 | AMM11064.1 | Salbus254_1363 | Salbus254_4608 | Two-component system sensor histidine kinase. | N-hydroxyarylamine O-acetyltransferase. | 0.685 |
AMM07906.1 | AMM12058.1 | Salbus254_1363 | Salbus254_5624 | Two-component system sensor histidine kinase. | Shikimate 5-dehydrogenase I alpha. | 0.466 |
AMM07906.1 | AMM12163.1 | Salbus254_1363 | Salbus254_5732 | Two-component system sensor histidine kinase. | MerR family regulatory protein. | 0.733 |
AMM07906.1 | coaE | Salbus254_1363 | Salbus254_5151 | Two-component system sensor histidine kinase. | Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.400 |
AMM07906.1 | mqnC | Salbus254_1363 | Salbus254_3818 | Two-component system sensor histidine kinase. | Menaquinone biosynthetic enzyme; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2). | 0.790 |
AMM07991.1 | AMM06562.1 | Salbus254_1455 | Salbus254_0001 | DNA processing Smf-family protein. | Hypothetical protein. | 0.401 |
AMM07991.1 | AMM07906.1 | Salbus254_1455 | Salbus254_1363 | DNA processing Smf-family protein. | Two-component system sensor histidine kinase. | 0.572 |
AMM07991.1 | AMM10284.1 | Salbus254_1455 | Salbus254_3816 | DNA processing Smf-family protein. | Type IV peptidase. | 0.714 |
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