Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMM06827.1 | AMM10529.1 | Salbus254_0269 | Salbus254_4066 | Transposase in snaA-snaB intergenic region. | LysR family transcriptional regulator. | 0.538 |
AMM06827.1 | AMM10531.1 | Salbus254_0269 | Salbus254_4068 | Transposase in snaA-snaB intergenic region. | Transposase. | 0.538 |
AMM07561.1 | AMM10531.1 | Salbus254_1011 | Salbus254_4068 | Hypothetical protein; TnsA endonuclease N terminal domain-containing protein. | Transposase. | 0.400 |
AMM09037.1 | AMM10529.1 | Salbus254_2528 | Salbus254_4066 | Transposase in snaA-snaB intergenic region. | LysR family transcriptional regulator. | 0.538 |
AMM09037.1 | AMM10531.1 | Salbus254_2528 | Salbus254_4068 | Transposase in snaA-snaB intergenic region. | Transposase. | 0.538 |
AMM10529.1 | AMM06827.1 | Salbus254_4066 | Salbus254_0269 | LysR family transcriptional regulator. | Transposase in snaA-snaB intergenic region. | 0.538 |
AMM10529.1 | AMM09037.1 | Salbus254_4066 | Salbus254_2528 | LysR family transcriptional regulator. | Transposase in snaA-snaB intergenic region. | 0.538 |
AMM10529.1 | AMM10530.1 | Salbus254_4066 | Salbus254_4067 | LysR family transcriptional regulator. | AAA ATPase. | 0.938 |
AMM10529.1 | AMM10531.1 | Salbus254_4066 | Salbus254_4068 | LysR family transcriptional regulator. | Transposase. | 0.953 |
AMM10529.1 | AMM10532.1 | Salbus254_4066 | Salbus254_4069 | LysR family transcriptional regulator. | Hypothetical protein; TnsA endonuclease N terminal domain-containing protein. | 0.952 |
AMM10529.1 | AMM10533.1 | Salbus254_4066 | Salbus254_4070 | LysR family transcriptional regulator. | NLP/P60 family secreted protein. | 0.404 |
AMM10529.1 | AMM10863.1 | Salbus254_4066 | Salbus254_4402 | LysR family transcriptional regulator. | Transposase in snaA-snaB intergenic region. | 0.538 |
AMM10529.1 | AMM11826.1 | Salbus254_4066 | Salbus254_5384 | LysR family transcriptional regulator. | Transposase, IS605 OrfB family protein. | 0.538 |
AMM10530.1 | AMM10529.1 | Salbus254_4067 | Salbus254_4066 | AAA ATPase. | LysR family transcriptional regulator. | 0.938 |
AMM10530.1 | AMM10531.1 | Salbus254_4067 | Salbus254_4068 | AAA ATPase. | Transposase. | 0.966 |
AMM10530.1 | AMM10532.1 | Salbus254_4067 | Salbus254_4069 | AAA ATPase. | Hypothetical protein; TnsA endonuclease N terminal domain-containing protein. | 0.966 |
AMM10530.1 | AMM10533.1 | Salbus254_4067 | Salbus254_4070 | AAA ATPase. | NLP/P60 family secreted protein. | 0.404 |
AMM10531.1 | AMM06827.1 | Salbus254_4068 | Salbus254_0269 | Transposase. | Transposase in snaA-snaB intergenic region. | 0.538 |
AMM10531.1 | AMM07561.1 | Salbus254_4068 | Salbus254_1011 | Transposase. | Hypothetical protein; TnsA endonuclease N terminal domain-containing protein. | 0.400 |
AMM10531.1 | AMM09037.1 | Salbus254_4068 | Salbus254_2528 | Transposase. | Transposase in snaA-snaB intergenic region. | 0.538 |
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