Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMM07421.1 | AMM11369.1 | Salbus254_0868 | Salbus254_4916 | DNA-binding protein. | TetR-family transcriptional regulator. | 0.617 |
AMM07421.1 | AMM12297.1 | Salbus254_0868 | Salbus254_5869 | DNA-binding protein. | TetR-family transcriptional regulator. | 0.616 |
AMM07460.1 | AMM11369.1 | Salbus254_0907 | Salbus254_4916 | Protein-tyrosine phosphatase. | TetR-family transcriptional regulator. | 0.650 |
AMM08006.1 | AMM09027.1 | Salbus254_1470 | Salbus254_2518 | Methyltransferase type 11. | Diguanylate cyclase. | 0.555 |
AMM08006.1 | AMM11369.1 | Salbus254_1470 | Salbus254_4916 | Methyltransferase type 11. | TetR-family transcriptional regulator. | 0.662 |
AMM08006.1 | AMM12297.1 | Salbus254_1470 | Salbus254_5869 | Methyltransferase type 11. | TetR-family transcriptional regulator. | 0.621 |
AMM08202.1 | AMM08330.1 | Salbus254_1672 | Salbus254_1802 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Arginine/ornithine binding protein. | 0.549 |
AMM08202.1 | AMM09027.1 | Salbus254_1672 | Salbus254_2518 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Diguanylate cyclase. | 0.808 |
AMM08202.1 | AMM11369.1 | Salbus254_1672 | Salbus254_4916 | Pyruvate kinase; Belongs to the pyruvate kinase family. | TetR-family transcriptional regulator. | 0.765 |
AMM08202.1 | AMM11787.1 | Salbus254_1672 | Salbus254_5343 | Pyruvate kinase; Belongs to the pyruvate kinase family. | ABC transporter substrate-binding protein. | 0.549 |
AMM08202.1 | AMM12297.1 | Salbus254_1672 | Salbus254_5869 | Pyruvate kinase; Belongs to the pyruvate kinase family. | TetR-family transcriptional regulator. | 0.765 |
AMM08330.1 | AMM08202.1 | Salbus254_1802 | Salbus254_1672 | Arginine/ornithine binding protein. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.549 |
AMM08330.1 | AMM09027.1 | Salbus254_1802 | Salbus254_2518 | Arginine/ornithine binding protein. | Diguanylate cyclase. | 0.797 |
AMM08330.1 | AMM11369.1 | Salbus254_1802 | Salbus254_4916 | Arginine/ornithine binding protein. | TetR-family transcriptional regulator. | 0.615 |
AMM08330.1 | AMM11581.1 | Salbus254_1802 | Salbus254_5132 | Arginine/ornithine binding protein. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.549 |
AMM08330.1 | AMM12297.1 | Salbus254_1802 | Salbus254_5869 | Arginine/ornithine binding protein. | TetR-family transcriptional regulator. | 0.538 |
AMM09027.1 | AMM08006.1 | Salbus254_2518 | Salbus254_1470 | Diguanylate cyclase. | Methyltransferase type 11. | 0.555 |
AMM09027.1 | AMM08202.1 | Salbus254_2518 | Salbus254_1672 | Diguanylate cyclase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.808 |
AMM09027.1 | AMM08330.1 | Salbus254_2518 | Salbus254_1802 | Diguanylate cyclase. | Arginine/ornithine binding protein. | 0.797 |
AMM09027.1 | AMM11369.1 | Salbus254_2518 | Salbus254_4916 | Diguanylate cyclase. | TetR-family transcriptional regulator. | 0.615 |
page 1 of 3