Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMM06641.1 | AMM11691.1 | Salbus254_0083 | Salbus254_5244 | Glyoxalase/bleomycin resistance protein/dioxygenase. | Glyoxalase. | 0.671 |
AMM07140.1 | AMM07495.1 | Salbus254_6332 | Salbus254_0942 | Hypothetical protein. | Acetyltransferase. | 0.920 |
AMM07140.1 | AMM08412.1 | Salbus254_6332 | Salbus254_1889 | Hypothetical protein. | Sulfur carrier protein adenylyltransferase ThiF. | 0.968 |
AMM07140.1 | AMM11155.1 | Salbus254_6332 | Salbus254_4699 | Hypothetical protein. | Formate dehydrogenase. | 0.925 |
AMM07140.1 | AMM11691.1 | Salbus254_6332 | Salbus254_5244 | Hypothetical protein. | Glyoxalase. | 0.741 |
AMM07140.1 | AMM12411.1 | Salbus254_6332 | Salbus254_5982 | Hypothetical protein. | Beta-lactamase domain-containing protein. | 0.896 |
AMM07297.1 | AMM11155.1 | Salbus254_0744 | Salbus254_4699 | Tryptophan synthase alpha chain. | Formate dehydrogenase. | 0.724 |
AMM07297.1 | AMM11691.1 | Salbus254_0744 | Salbus254_5244 | Tryptophan synthase alpha chain. | Glyoxalase. | 0.591 |
AMM07297.1 | trpA | Salbus254_0744 | Salbus254_5108 | Tryptophan synthase alpha chain. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.905 |
AMM07495.1 | AMM07140.1 | Salbus254_0942 | Salbus254_6332 | Acetyltransferase. | Hypothetical protein. | 0.920 |
AMM07495.1 | AMM08412.1 | Salbus254_0942 | Salbus254_1889 | Acetyltransferase. | Sulfur carrier protein adenylyltransferase ThiF. | 0.948 |
AMM07495.1 | AMM11155.1 | Salbus254_0942 | Salbus254_4699 | Acetyltransferase. | Formate dehydrogenase. | 0.824 |
AMM07495.1 | AMM11691.1 | Salbus254_0942 | Salbus254_5244 | Acetyltransferase. | Glyoxalase. | 0.651 |
AMM07495.1 | AMM12411.1 | Salbus254_0942 | Salbus254_5982 | Acetyltransferase. | Beta-lactamase domain-containing protein. | 0.920 |
AMM08412.1 | AMM07140.1 | Salbus254_1889 | Salbus254_6332 | Sulfur carrier protein adenylyltransferase ThiF. | Hypothetical protein. | 0.968 |
AMM08412.1 | AMM07495.1 | Salbus254_1889 | Salbus254_0942 | Sulfur carrier protein adenylyltransferase ThiF. | Acetyltransferase. | 0.948 |
AMM08412.1 | AMM11155.1 | Salbus254_1889 | Salbus254_4699 | Sulfur carrier protein adenylyltransferase ThiF. | Formate dehydrogenase. | 0.588 |
AMM08412.1 | AMM11691.1 | Salbus254_1889 | Salbus254_5244 | Sulfur carrier protein adenylyltransferase ThiF. | Glyoxalase. | 0.629 |
AMM08412.1 | AMM11692.1 | Salbus254_1889 | Salbus254_5245 | Sulfur carrier protein adenylyltransferase ThiF. | ABC transporter related protein. | 0.631 |
AMM08412.1 | AMM12411.1 | Salbus254_1889 | Salbus254_5982 | Sulfur carrier protein adenylyltransferase ThiF. | Beta-lactamase domain-containing protein. | 0.968 |
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