Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMM06855.1 | AMM06856.1 | Salbus254_0297 | Salbus254_0298 | 1-phosphofructokinase. | PTS system, fructose-specific IIA/IIB/IIC component. | 0.999 |
AMM06855.1 | AMM06857.1 | Salbus254_0297 | Salbus254_0299 | 1-phosphofructokinase. | Phosphotransferase system, phosphocarrier protein HPr. | 0.927 |
AMM06855.1 | AMM06858.1 | Salbus254_0297 | Salbus254_0300 | 1-phosphofructokinase. | Phosphoenolpyruvate-protein phosphotransferase of PTS system. | 0.860 |
AMM06855.1 | AMM07124.1 | Salbus254_0297 | Salbus254_0571 | 1-phosphofructokinase. | Sugar-transporter. | 0.954 |
AMM06855.1 | AMM07814.1 | Salbus254_0297 | Salbus254_1271 | 1-phosphofructokinase. | Phosphocarrier protein hpr. | 0.874 |
AMM06855.1 | AMM09144.1 | Salbus254_0297 | Salbus254_2637 | 1-phosphofructokinase. | PTS sucrose-specific enzyme IIBC component. | 0.533 |
AMM06855.1 | AMM12154.1 | Salbus254_0297 | Salbus254_5720 | 1-phosphofructokinase. | Phosphoenolpyruvate-protein phosphotransferase of PTS system; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). | 0.779 |
AMM06856.1 | AMM06855.1 | Salbus254_0298 | Salbus254_0297 | PTS system, fructose-specific IIA/IIB/IIC component. | 1-phosphofructokinase. | 0.999 |
AMM06856.1 | AMM06857.1 | Salbus254_0298 | Salbus254_0299 | PTS system, fructose-specific IIA/IIB/IIC component. | Phosphotransferase system, phosphocarrier protein HPr. | 0.999 |
AMM06856.1 | AMM06858.1 | Salbus254_0298 | Salbus254_0300 | PTS system, fructose-specific IIA/IIB/IIC component. | Phosphoenolpyruvate-protein phosphotransferase of PTS system. | 0.999 |
AMM06856.1 | AMM07124.1 | Salbus254_0298 | Salbus254_0571 | PTS system, fructose-specific IIA/IIB/IIC component. | Sugar-transporter. | 0.998 |
AMM06856.1 | AMM07814.1 | Salbus254_0298 | Salbus254_1271 | PTS system, fructose-specific IIA/IIB/IIC component. | Phosphocarrier protein hpr. | 0.998 |
AMM06856.1 | AMM08562.1 | Salbus254_0298 | Salbus254_2043 | PTS system, fructose-specific IIA/IIB/IIC component. | Phosphotransferase system IIB component. | 0.840 |
AMM06856.1 | AMM08563.1 | Salbus254_0298 | Salbus254_2044 | PTS system, fructose-specific IIA/IIB/IIC component. | PTS transmembrane component. | 0.838 |
AMM06856.1 | AMM09144.1 | Salbus254_0298 | Salbus254_2637 | PTS system, fructose-specific IIA/IIB/IIC component. | PTS sucrose-specific enzyme IIBC component. | 0.926 |
AMM06856.1 | AMM12154.1 | Salbus254_0298 | Salbus254_5720 | PTS system, fructose-specific IIA/IIB/IIC component. | Phosphoenolpyruvate-protein phosphotransferase of PTS system; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). | 0.998 |
AMM06856.1 | AMM12155.1 | Salbus254_0298 | Salbus254_5721 | PTS system, fructose-specific IIA/IIB/IIC component. | Phosphoenolpyruvate-dependent sugar phosphotransferase. | 0.997 |
AMM06857.1 | AMM06855.1 | Salbus254_0299 | Salbus254_0297 | Phosphotransferase system, phosphocarrier protein HPr. | 1-phosphofructokinase. | 0.927 |
AMM06857.1 | AMM06856.1 | Salbus254_0299 | Salbus254_0298 | Phosphotransferase system, phosphocarrier protein HPr. | PTS system, fructose-specific IIA/IIB/IIC component. | 0.999 |
AMM06857.1 | AMM06858.1 | Salbus254_0299 | Salbus254_0300 | Phosphotransferase system, phosphocarrier protein HPr. | Phosphoenolpyruvate-protein phosphotransferase of PTS system. | 0.999 |
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