Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMM08588.1 | AMM10107.1 | Salbus254_2068 | Salbus254_3635 | ABC transporter substrate-binding protein. | Amino acid ABC transporter amino acid-binding protein. | 0.988 |
AMM08588.1 | AMM12167.1 | Salbus254_2068 | Salbus254_5736 | ABC transporter substrate-binding protein. | Hypothetical protein. | 0.530 |
AMM08588.1 | AMM12622.1 | Salbus254_2068 | Salbus254_6193 | ABC transporter substrate-binding protein. | Amino acid ABC transporter amino acid-binding protein. | 0.988 |
AMM09569.1 | AMM11180.1 | Salbus254_3085 | Salbus254_4727 | Hypothetical protein. | Catalase. | 0.430 |
AMM09569.1 | AMM11480.1 | Salbus254_3085 | Salbus254_5029 | Hypothetical protein. | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | 0.514 |
AMM09569.1 | AMM12167.1 | Salbus254_3085 | Salbus254_5736 | Hypothetical protein. | Hypothetical protein. | 0.466 |
AMM10107.1 | AMM08588.1 | Salbus254_3635 | Salbus254_2068 | Amino acid ABC transporter amino acid-binding protein. | ABC transporter substrate-binding protein. | 0.988 |
AMM10107.1 | AMM12167.1 | Salbus254_3635 | Salbus254_5736 | Amino acid ABC transporter amino acid-binding protein. | Hypothetical protein. | 0.530 |
AMM10107.1 | AMM12622.1 | Salbus254_3635 | Salbus254_6193 | Amino acid ABC transporter amino acid-binding protein. | Amino acid ABC transporter amino acid-binding protein. | 0.989 |
AMM10132.1 | AMM11180.1 | Salbus254_3660 | Salbus254_4727 | Integral membrane protein; Overlaps another CDS with the same product name. | Catalase. | 0.400 |
AMM10132.1 | AMM12167.1 | Salbus254_3660 | Salbus254_5736 | Integral membrane protein; Overlaps another CDS with the same product name. | Hypothetical protein. | 0.577 |
AMM10593.1 | AMM11180.1 | Salbus254_4131 | Salbus254_4727 | CsbD family protein; Belongs to the UPF0337 (CsbD) family. | Catalase. | 0.473 |
AMM10593.1 | AMM11480.1 | Salbus254_4131 | Salbus254_5029 | CsbD family protein; Belongs to the UPF0337 (CsbD) family. | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | 0.400 |
AMM10593.1 | AMM12167.1 | Salbus254_4131 | Salbus254_5736 | CsbD family protein; Belongs to the UPF0337 (CsbD) family. | Hypothetical protein. | 0.414 |
AMM11180.1 | AMM09569.1 | Salbus254_4727 | Salbus254_3085 | Catalase. | Hypothetical protein. | 0.430 |
AMM11180.1 | AMM10132.1 | Salbus254_4727 | Salbus254_3660 | Catalase. | Integral membrane protein; Overlaps another CDS with the same product name. | 0.400 |
AMM11180.1 | AMM10593.1 | Salbus254_4727 | Salbus254_4131 | Catalase. | CsbD family protein; Belongs to the UPF0337 (CsbD) family. | 0.473 |
AMM11180.1 | AMM11480.1 | Salbus254_4727 | Salbus254_5029 | Catalase. | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | 0.650 |
AMM11180.1 | AMM11575.1 | Salbus254_4727 | Salbus254_5126 | Catalase. | CsbD family protein. | 0.473 |
AMM11180.1 | AMM12167.1 | Salbus254_4727 | Salbus254_5736 | Catalase. | Hypothetical protein. | 0.640 |
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