Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMM07900.1 | AMM09027.1 | Salbus254_1357 | Salbus254_2518 | Competence-damage inducible protein. | Diguanylate cyclase. | 0.400 |
AMM07900.1 | AMM12087.1 | Salbus254_1357 | Salbus254_5653 | Competence-damage inducible protein. | RNA-binding Sun protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.453 |
AMM07900.1 | AMM12398.1 | Salbus254_1357 | Salbus254_5969 | Competence-damage inducible protein. | Membrane protein. | 0.628 |
AMM07900.1 | nadE | Salbus254_1357 | Salbus254_4888 | Competence-damage inducible protein. | NAD(+) synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.942 |
AMM07900.1 | nadK | Salbus254_1357 | Salbus254_5306 | Competence-damage inducible protein. | Inorganic polyphosphate/ATP-NAD kinase 2; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.841 |
AMM09027.1 | AMM07900.1 | Salbus254_2518 | Salbus254_1357 | Diguanylate cyclase. | Competence-damage inducible protein. | 0.400 |
AMM09027.1 | AMM10552.1 | Salbus254_2518 | Salbus254_4090 | Diguanylate cyclase. | Hypothetical protein. | 0.753 |
AMM09027.1 | AMM11526.1 | Salbus254_2518 | Salbus254_5077 | Diguanylate cyclase. | Membrane protein. | 0.755 |
AMM09027.1 | AMM11600.1 | Salbus254_2518 | Salbus254_5152 | Diguanylate cyclase. | Hypothetical protein. | 0.768 |
AMM09027.1 | AMM12228.1 | Salbus254_2518 | Salbus254_5800 | Diguanylate cyclase. | Integral membrane protein. | 0.561 |
AMM09027.1 | AMM12398.1 | Salbus254_2518 | Salbus254_5969 | Diguanylate cyclase. | Membrane protein. | 0.638 |
AMM10552.1 | AMM09027.1 | Salbus254_4090 | Salbus254_2518 | Hypothetical protein. | Diguanylate cyclase. | 0.753 |
AMM10552.1 | AMM11600.1 | Salbus254_4090 | Salbus254_5152 | Hypothetical protein. | Hypothetical protein. | 0.400 |
AMM10552.1 | AMM12087.1 | Salbus254_4090 | Salbus254_5653 | Hypothetical protein. | RNA-binding Sun protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.734 |
AMM10552.1 | AMM12398.1 | Salbus254_4090 | Salbus254_5969 | Hypothetical protein. | Membrane protein. | 0.658 |
AMM10552.1 | nadE | Salbus254_4090 | Salbus254_4888 | Hypothetical protein. | NAD(+) synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.710 |
AMM10552.1 | nadK | Salbus254_4090 | Salbus254_5306 | Hypothetical protein. | Inorganic polyphosphate/ATP-NAD kinase 2; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.400 |
AMM10552.1 | nusB | Salbus254_4090 | Salbus254_5631 | Hypothetical protein. | N utilization substance protein B; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.400 |
AMM11526.1 | AMM09027.1 | Salbus254_5077 | Salbus254_2518 | Membrane protein. | Diguanylate cyclase. | 0.755 |
AMM11526.1 | AMM11600.1 | Salbus254_5077 | Salbus254_5152 | Membrane protein. | Hypothetical protein. | 0.627 |
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