Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMM08109.1 | AMM08114.1 | Salbus254_1579 | Salbus254_1584 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Dehydrogenase. | 0.786 |
AMM08109.1 | AMM08271.1 | Salbus254_1579 | Salbus254_1741 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Homoserine dehydrogenase. | 0.968 |
AMM08109.1 | AMM08514.1 | Salbus254_1579 | Salbus254_1992 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | NAD-binding protein. | 0.619 |
AMM08109.1 | AMM09382.1 | Salbus254_1579 | Salbus254_2880 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 2-hydroxyacid-family dehydrogenase. | 0.897 |
AMM08109.1 | AMM12642.1 | Salbus254_1579 | Salbus254_6213 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | FAD linked oxidase domain-containing protein. | 0.603 |
AMM08109.1 | AMM12645.1 | Salbus254_1579 | Salbus254_6216 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Major facilitator superfamily transporter MFS 1. | 0.813 |
AMM08109.1 | AMM12729.1 | Salbus254_1579 | Salbus254_6319 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Polyketide synthase. | 0.776 |
AMM08114.1 | AMM08109.1 | Salbus254_1584 | Salbus254_1579 | Dehydrogenase. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.786 |
AMM08114.1 | AMM08271.1 | Salbus254_1584 | Salbus254_1741 | Dehydrogenase. | Homoserine dehydrogenase. | 0.834 |
AMM08114.1 | AMM12642.1 | Salbus254_1584 | Salbus254_6213 | Dehydrogenase. | FAD linked oxidase domain-containing protein. | 0.544 |
AMM08114.1 | AMM12645.1 | Salbus254_1584 | Salbus254_6216 | Dehydrogenase. | Major facilitator superfamily transporter MFS 1. | 0.670 |
AMM08114.1 | AMM12729.1 | Salbus254_1584 | Salbus254_6319 | Dehydrogenase. | Polyketide synthase. | 0.636 |
AMM08271.1 | AMM08109.1 | Salbus254_1741 | Salbus254_1579 | Homoserine dehydrogenase. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.968 |
AMM08271.1 | AMM08114.1 | Salbus254_1741 | Salbus254_1584 | Homoserine dehydrogenase. | Dehydrogenase. | 0.834 |
AMM08271.1 | AMM08514.1 | Salbus254_1741 | Salbus254_1992 | Homoserine dehydrogenase. | NAD-binding protein. | 0.834 |
AMM08271.1 | AMM09382.1 | Salbus254_1741 | Salbus254_2880 | Homoserine dehydrogenase. | 2-hydroxyacid-family dehydrogenase. | 0.834 |
AMM08271.1 | AMM12645.1 | Salbus254_1741 | Salbus254_6216 | Homoserine dehydrogenase. | Major facilitator superfamily transporter MFS 1. | 0.757 |
AMM08514.1 | AMM08109.1 | Salbus254_1992 | Salbus254_1579 | NAD-binding protein. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.619 |
AMM08514.1 | AMM08271.1 | Salbus254_1992 | Salbus254_1741 | NAD-binding protein. | Homoserine dehydrogenase. | 0.834 |
AMM08514.1 | AMM12642.1 | Salbus254_1992 | Salbus254_6213 | NAD-binding protein. | FAD linked oxidase domain-containing protein. | 0.544 |
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