STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001708305_01886Unannotated protein. (414 aa)    
Predicted Functional Partners:
GCA_001708305_01887
Unannotated protein.
 
   
 0.823
GCA_001708305_01888
Unannotated protein.
     
 0.793
GCA_001708305_01889
Unannotated protein.
       0.786
GCA_001708305_00094
Unannotated protein.
  
   
 0.626
GCA_001708305_01599
Unannotated protein.
  
     0.616
GCA_001708305_01890
Unannotated protein.
       0.540
GCA_001708305_01891
Unannotated protein.
       0.532
GCA_001708305_00861
Unannotated protein.
  
     0.527
GCA_001708305_01892
Unannotated protein.
       0.491
GCA_001708305_00644
Unannotated protein.
  
     0.485
Your Current Organism:
Streptococcus himalayensis
NCBI taxonomy Id: 1888195
Other names: CGMCC 1.15533, DSM 101997, S. himalayensis, Streptococcus himalayensis Niu et al. 2017, Streptococcus sp. HTS10, Streptococcus sp. HTS14, Streptococcus sp. HTS2, Streptococcus sp. HTS23, Streptococcus sp. HTS29, strain HTS2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.