STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001708305_02167Unannotated protein. (782 aa)    
Predicted Functional Partners:
GCA_001708305_00036
Unannotated protein.
  
 
 0.911
GCA_001708305_01476
Unannotated protein.
  
  0.698
GCA_001708305_01004
Unannotated protein.
  
 0.674
GCA_001708305_01005
Unannotated protein.
  
 0.674
GCA_001708305_00434
Unannotated protein.
  
 0.673
GCA_001708305_01781
Unannotated protein.
  
 0.672
GCA_001708305_00433
Unannotated protein.
  
 0.668
GCA_001708305_01780
Unannotated protein.
  
 0.668
GCA_001708305_00551
Unannotated protein.
  
 0.666
GCA_001708305_00176
Unannotated protein.
   
  0.638
Your Current Organism:
Streptococcus himalayensis
NCBI taxonomy Id: 1888195
Other names: CGMCC 1.15533, DSM 101997, S. himalayensis, Streptococcus himalayensis Niu et al. 2017, Streptococcus sp. HTS10, Streptococcus sp. HTS14, Streptococcus sp. HTS2, Streptococcus sp. HTS23, Streptococcus sp. HTS29, strain HTS2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.