STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG05634.1Hypothetical protein. (390 aa)    
Predicted Functional Partners:
SMG05626.1
Glutamine synthetase.
 
  
 0.889
SMG41071.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase.
   
 0.871
SMG05630.1
Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family.
 0.867
SMG18436.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
 
 0.853
SMG39225.1
Glutamate synthase (ferredoxin).
   
 
 0.837
SMG06737.1
Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit.
     
 0.828
SMG05636.1
GMP synthase (glutamine-hydrolysing).
 
     0.822
SMG43617.1
Polar amino acid transport system substrate-binding protein.
  
 0.792
SMG26513.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.791
SMG49364.1
Quinoprotein glucose dehydrogenase.
     
 0.784
Your Current Organism:
Arenibacter troitsensis
NCBI taxonomy Id: 188872
Other names: A. troitsensis, Arenibacter trinitatis, Arenibacter troitsensis Nedashkovskaya et al. 2003, DSM 19835, JCM 11736, KMM 3674, NBRC 101532
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