Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMG06098.1 | SMG06408.1 | SAMN03080602_00074 | SAMN03080602_00111 | Histidine ammonia-lyase. | Imidazolonepropionase. | 0.604 |
SMG06098.1 | SMG10469.1 | SAMN03080602_00074 | SAMN03080602_00523 | Histidine ammonia-lyase. | Histidine ammonia-lyase. | 0.850 |
SMG06098.1 | SMG25439.1 | SAMN03080602_00074 | SAMN03080602_01638 | Histidine ammonia-lyase. | Amidohydrolase family protein. | 0.630 |
SMG06098.1 | SMG50494.1 | SAMN03080602_00074 | SAMN03080602_03983 | Histidine ammonia-lyase. | Imidazolonepropionase. | 0.635 |
SMG06408.1 | SMG06098.1 | SAMN03080602_00111 | SAMN03080602_00074 | Imidazolonepropionase. | Histidine ammonia-lyase. | 0.604 |
SMG06408.1 | SMG06420.1 | SAMN03080602_00111 | SAMN03080602_00112 | Imidazolonepropionase. | CubicO group peptidase, beta-lactamase class C family. | 0.673 |
SMG06408.1 | SMG10469.1 | SAMN03080602_00111 | SAMN03080602_00523 | Imidazolonepropionase. | Histidine ammonia-lyase. | 0.604 |
SMG06408.1 | SMG18494.1 | SAMN03080602_00111 | SAMN03080602_01088 | Imidazolonepropionase. | Uracil phosphoribosyltransferase. | 0.647 |
SMG06408.1 | SMG25439.1 | SAMN03080602_00111 | SAMN03080602_01638 | Imidazolonepropionase. | Amidohydrolase family protein. | 0.630 |
SMG06408.1 | SMG26371.1 | SAMN03080602_00111 | SAMN03080602_01742 | Imidazolonepropionase. | Uridine phosphorylase. | 0.584 |
SMG06408.1 | SMG31064.1 | SAMN03080602_00111 | SAMN03080602_02136 | Imidazolonepropionase. | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.634 |
SMG06408.1 | SMG50494.1 | SAMN03080602_00111 | SAMN03080602_03983 | Imidazolonepropionase. | Imidazolonepropionase. | 0.600 |
SMG06408.1 | adk | SAMN03080602_00111 | SAMN03080602_02801 | Imidazolonepropionase. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.668 |
SMG06408.1 | pyrD | SAMN03080602_00111 | SAMN03080602_01216 | Imidazolonepropionase. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.563 |
SMG06420.1 | SMG06408.1 | SAMN03080602_00112 | SAMN03080602_00111 | CubicO group peptidase, beta-lactamase class C family. | Imidazolonepropionase. | 0.673 |
SMG10469.1 | SMG06098.1 | SAMN03080602_00523 | SAMN03080602_00074 | Histidine ammonia-lyase. | Histidine ammonia-lyase. | 0.850 |
SMG10469.1 | SMG06408.1 | SAMN03080602_00523 | SAMN03080602_00111 | Histidine ammonia-lyase. | Imidazolonepropionase. | 0.604 |
SMG10469.1 | SMG25439.1 | SAMN03080602_00523 | SAMN03080602_01638 | Histidine ammonia-lyase. | Amidohydrolase family protein. | 0.630 |
SMG10469.1 | SMG50494.1 | SAMN03080602_00523 | SAMN03080602_03983 | Histidine ammonia-lyase. | Imidazolonepropionase. | 0.635 |
SMG18494.1 | SMG06408.1 | SAMN03080602_01088 | SAMN03080602_00111 | Uracil phosphoribosyltransferase. | Imidazolonepropionase. | 0.647 |
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