STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG07112.1Type IX secretion system membrane protein, PorP/SprF family. (330 aa)    
Predicted Functional Partners:
SMG07115.1
Outer membrane protein OmpA.
 
     0.932
SMG07072.1
Gliding motility-associated C-terminal domain-containing protein.
 
     0.852
SMG35704.1
WD40-like Beta Propeller Repeat.
  
     0.768
SMG25530.1
WD40-like Beta Propeller Repeat.
  
     0.755
SMG43722.1
WD40-like Beta Propeller Repeat.
 
     0.754
SMG35721.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.747
SMG06990.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.736
SMG43777.1
Hypothetical protein.
  
   
 0.720
SMG36884.1
Protein of unknown function.
  
     0.709
SMG06820.1
Cell surface protein SprA.
  
   
 0.701
Your Current Organism:
Arenibacter troitsensis
NCBI taxonomy Id: 188872
Other names: A. troitsensis, Arenibacter trinitatis, Arenibacter troitsensis Nedashkovskaya et al. 2003, DSM 19835, JCM 11736, KMM 3674, NBRC 101532
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.