STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG07813.1Gliding motility-associated lipoprotein GldB. (321 aa)    
Predicted Functional Partners:
SMG07838.1
Protein involved in gliding motility GldC.
 
   
 0.840
SMG31446.1
Gliding motility-associated lipoprotein GldD.
  
   
 0.835
SMG39149.1
Gliding motility-associated lipoprotein GldJ.
  
   
 0.832
SMG06820.1
Cell surface protein SprA.
  
   
 0.825
SMG29882.1
Gliding motility-associated protein GldL.
  
   
 0.816
SMG43777.1
Hypothetical protein.
  
   
 0.813
SMG29875.1
Gliding motility-associated protein GldM.
  
   
 0.811
SMG08319.1
Outer membrane protein beta-barrel domain-containing protein.
  
   
 0.805
SMG29868.1
Gliding motility associated protien GldN.
  
   
 0.805
SMG19449.1
Gliding-associated putative ABC transporter substrate-binding component GldG.
  
   
 0.799
Your Current Organism:
Arenibacter troitsensis
NCBI taxonomy Id: 188872
Other names: A. troitsensis, Arenibacter trinitatis, Arenibacter troitsensis Nedashkovskaya et al. 2003, DSM 19835, JCM 11736, KMM 3674, NBRC 101532
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.