STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG10183.1Hypothetical protein. (1231 aa)    
Predicted Functional Partners:
SMG10191.1
Glycosyltransferase involved in cell wall bisynthesis.
    0.962
SMG10213.1
Outer membrane lipoprotein carrier protein.
 
    0.921
SMG10202.1
3-hydroxyacyl-[acyl-carrier-protein] dehydratase.
 
   
 0.920
SMG10272.1
3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
    0.919
SMG10153.1
All-trans-retinol 13,14-reductase.
 
  
 0.910
SMG10305.1
Acyl carrier protein.
 
 
 0.907
SMG10128.1
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase.
 
     0.891
SMG10441.1
Acyl carrier protein.
 
 
 0.886
SMG10101.1
phenylacetate-CoA ligase.
 
     0.884
SMG10308.1
Hypothetical protein.
 
    0.861
Your Current Organism:
Arenibacter troitsensis
NCBI taxonomy Id: 188872
Other names: A. troitsensis, Arenibacter trinitatis, Arenibacter troitsensis Nedashkovskaya et al. 2003, DSM 19835, JCM 11736, KMM 3674, NBRC 101532
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.