STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG26346.12-oxoisovalerate dehydrogenase E1 component. (658 aa)    
Predicted Functional Partners:
SMG06486.1
2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
 0.999
SMG11467.1
Dihydrolipoamide dehydrogenase.
 0.999
SMG39112.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 0.999
SMG47401.1
Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component.
 
0.999
SMG52237.1
2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase).
 0.999
SMG53161.1
Dihydrolipoamide dehydrogenase.
 0.998
SMG06810.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
 
 0.989
SMG41597.1
Ribose-phosphate pyrophosphokinase.
  
 0.975
SMG18436.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
 
 0.974
SMG26338.1
Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.964
Your Current Organism:
Arenibacter troitsensis
NCBI taxonomy Id: 188872
Other names: A. troitsensis, Arenibacter trinitatis, Arenibacter troitsensis Nedashkovskaya et al. 2003, DSM 19835, JCM 11736, KMM 3674, NBRC 101532
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