STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG36770.1Hypothetical protein. (239 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.790
SMG36757.1
Collagen triple helix repeat-containing protein.
   
  0.787
SMG36764.1
Hypothetical protein.
      
0.773
SMG36774.1
Hypothetical protein.
       0.692
SMG52228.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
    
  0.685
SMG32261.1
Uncharacterized conserved protein YkwD, contains CAP (CSP/antigen 5/PR1) domain.
   
    0.485
SMG36778.1
Gliding motility-associated C-terminal domain-containing protein.
  
 
  0.476
SMG14262.1
Protein of unknown function.
  
 0.468
SMG14269.1
Protein of unknown function.
  
 0.468
SMG14280.1
Protein of unknown function.
  
 0.468
Your Current Organism:
Arenibacter troitsensis
NCBI taxonomy Id: 188872
Other names: A. troitsensis, Arenibacter trinitatis, Arenibacter troitsensis Nedashkovskaya et al. 2003, DSM 19835, JCM 11736, KMM 3674, NBRC 101532
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.