STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG37596.1Nitrous oxidase accessory protein. (412 aa)    
Predicted Functional Partners:
SMG37606.1
Copper chaperone NosL.
 
 0.994
SMG37581.1
Cu-processing system permease protein.
 
 0.991
SMG37611.1
Hypothetical protein.
 
 0.987
SMG37592.1
Cu-processing system ATP-binding protein.
 0.986
SMG37616.1
Nitrous-oxide reductase.
 
  
 0.936
SMG37573.1
Hypothetical protein.
 
    0.896
SMG37652.1
Cytochrome c.
 
    0.842
SMG19261.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
 0.816
SMG19448.1
ABC-2 type transport system permease protein.
  
 0.816
SMG49801.1
ABC-2 type transport system permease protein.
  
 0.816
Your Current Organism:
Arenibacter troitsensis
NCBI taxonomy Id: 188872
Other names: A. troitsensis, Arenibacter trinitatis, Arenibacter troitsensis Nedashkovskaya et al. 2003, DSM 19835, JCM 11736, KMM 3674, NBRC 101532
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