STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG41273.1Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. (356 aa)    
Predicted Functional Partners:
uxaC
D-glucuronate isomerase.
 
 
 0.916
SMG45378.1
Tagaturonate reductase.
 
 
 0.836
SMG37313.1
2-dehydro-3-deoxygluconokinase.
 
  
 0.776
SMG49339.1
Ribose 5-phosphate isomerase B.
   
 
  0.708
SMG27182.1
3-hexulose-6-phosphate synthase / 6-phospho-3-hexuloisomerase.
     
 0.677
SMG41262.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
 
  0.581
SMG45373.1
Altronate hydrolase.
 
 
 0.534
SMG41267.1
6-phosphogluconolactonase.
 
     0.531
SMG41181.1
Regulator of RNase E activity RraA.
 
  
  0.475
SMG27312.1
Altronate hydrolase.
  
 
 0.456
Your Current Organism:
Arenibacter troitsensis
NCBI taxonomy Id: 188872
Other names: A. troitsensis, Arenibacter trinitatis, Arenibacter troitsensis Nedashkovskaya et al. 2003, DSM 19835, JCM 11736, KMM 3674, NBRC 101532
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