STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG42067.1solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (494 aa)    
Predicted Functional Partners:
SMG13636.1
Cyclically-permuted mutarotase family protein.
 
      0.847
SMG24865.1
L-proline dehydrogenase.
  
  
 0.625
SMG42054.1
Predicted neuraminidase (sialidase).
 
     0.507
SMG53281.1
Carbon starvation protein CstA.
  
    0.500
SMG24580.1
Signal transduction histidine kinase.
     
 0.485
SMG36392.1
Signal transduction histidine kinase.
     
 0.485
SMG25842.1
PAS domain S-box-containing protein.
   
 
 0.476
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.446
SMG42072.1
Transcriptional regulator, LacI family.
       0.441
SMG42059.1
BNR repeat-like domain-containing protein.
       0.432
Your Current Organism:
Arenibacter troitsensis
NCBI taxonomy Id: 188872
Other names: A. troitsensis, Arenibacter trinitatis, Arenibacter troitsensis Nedashkovskaya et al. 2003, DSM 19835, JCM 11736, KMM 3674, NBRC 101532
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.