Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SMG06535.1 | SMG06545.1 | SAMN03080602_00142 | SAMN03080602_00143 | Biopolymer transport protein ExbD. | Biopolymer transport protein ExbD. | 0.947 |
| SMG06535.1 | SMG06888.1 | SAMN03080602_00142 | SAMN03080602_00186 | Biopolymer transport protein ExbD. | Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.965 |
| SMG06535.1 | SMG11779.1 | SAMN03080602_00142 | SAMN03080602_00632 | Biopolymer transport protein ExbD. | Hypothetical protein. | 0.774 |
| SMG06535.1 | SMG30316.1 | SAMN03080602_00142 | SAMN03080602_02031 | Biopolymer transport protein ExbD. | Hypothetical protein. | 0.774 |
| SMG06535.1 | SMG43735.1 | SAMN03080602_00142 | SAMN03080602_03198 | Biopolymer transport protein ExbD. | Protein of unknown function. | 0.773 |
| SMG06545.1 | SMG06535.1 | SAMN03080602_00143 | SAMN03080602_00142 | Biopolymer transport protein ExbD. | Biopolymer transport protein ExbD. | 0.947 |
| SMG06545.1 | SMG06888.1 | SAMN03080602_00143 | SAMN03080602_00186 | Biopolymer transport protein ExbD. | Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.965 |
| SMG06545.1 | SMG11779.1 | SAMN03080602_00143 | SAMN03080602_00632 | Biopolymer transport protein ExbD. | Hypothetical protein. | 0.773 |
| SMG06545.1 | SMG30316.1 | SAMN03080602_00143 | SAMN03080602_02031 | Biopolymer transport protein ExbD. | Hypothetical protein. | 0.772 |
| SMG06545.1 | SMG43735.1 | SAMN03080602_00143 | SAMN03080602_03198 | Biopolymer transport protein ExbD. | Protein of unknown function. | 0.774 |
| SMG06888.1 | SMG06535.1 | SAMN03080602_00186 | SAMN03080602_00142 | Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Biopolymer transport protein ExbD. | 0.965 |
| SMG06888.1 | SMG06545.1 | SAMN03080602_00186 | SAMN03080602_00143 | Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Biopolymer transport protein ExbD. | 0.965 |
| SMG06888.1 | SMG11779.1 | SAMN03080602_00186 | SAMN03080602_00632 | Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Hypothetical protein. | 0.771 |
| SMG06888.1 | SMG30312.1 | SAMN03080602_00186 | SAMN03080602_02030 | Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | LPS export ABC transporter protein LptC. | 0.422 |
| SMG06888.1 | SMG30316.1 | SAMN03080602_00186 | SAMN03080602_02031 | Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Hypothetical protein. | 0.773 |
| SMG06888.1 | SMG43735.1 | SAMN03080602_00186 | SAMN03080602_03198 | Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Protein of unknown function. | 0.764 |
| SMG08037.1 | SMG08068.1 | SAMN03080602_00293 | SAMN03080602_00296 | Cell division protein FtsW; Belongs to the SEDS family. | Cell division protein FtsQ. | 0.978 |
| SMG08037.1 | SMG43735.1 | SAMN03080602_00293 | SAMN03080602_03198 | Cell division protein FtsW; Belongs to the SEDS family. | Protein of unknown function. | 0.764 |
| SMG08068.1 | SMG08037.1 | SAMN03080602_00296 | SAMN03080602_00293 | Cell division protein FtsQ. | Cell division protein FtsW; Belongs to the SEDS family. | 0.978 |
| SMG08068.1 | SMG30136.1 | SAMN03080602_00296 | SAMN03080602_02009 | Cell division protein FtsQ. | Rod shape determining protein RodA; Belongs to the SEDS family. | 0.860 |
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