STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG44769.1MORN repeat variant. (116 aa)    
Predicted Functional Partners:
SMG44775.1
Hypothetical protein.
       0.773
SMG47404.1
Hypothetical protein.
  
     0.717
SMG06911.1
Hypothetical protein.
  
     0.673
SMG47342.1
Patatin-like phospholipase.
  
     0.640
SMG47338.1
Patatin-like phospholipase.
  
     0.615
SMG52697.1
CarboxypepD_reg-like domain-containing protein.
  
     0.599
SMG33304.1
Hypothetical protein.
  
     0.591
SMG31118.1
Threonine/homoserine/homoserine lactone efflux protein.
  
     0.579
SMG43938.1
Hypothetical protein.
  
   0.564
SMG44005.1
Hypothetical protein.
  
     0.561
Your Current Organism:
Arenibacter troitsensis
NCBI taxonomy Id: 188872
Other names: A. troitsensis, Arenibacter trinitatis, Arenibacter troitsensis Nedashkovskaya et al. 2003, DSM 19835, JCM 11736, KMM 3674, NBRC 101532
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.