STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG49730.1Two component regulator propeller. (1388 aa)    
Predicted Functional Partners:
SMG06282.1
ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain.
 
0.999
SMG18479.1
PAS domain S-box-containing protein.
 
0.999
SMG18531.1
PAS domain S-box-containing protein.
  
0.999
SMG18949.1
PAS domain S-box-containing protein.
  
 0.999
SMG24580.1
Signal transduction histidine kinase.
 0.999
SMG25842.1
PAS domain S-box-containing protein.
 
0.999
SMG36392.1
Signal transduction histidine kinase.
 
0.999
SMG48198.1
Predicted ATPase.
 
0.999
SMG52428.1
PAS domain S-box-containing protein.
  
 0.999
SMG52423.1
PAS domain S-box-containing protein.
   
 0.998
Your Current Organism:
Arenibacter troitsensis
NCBI taxonomy Id: 188872
Other names: A. troitsensis, Arenibacter trinitatis, Arenibacter troitsensis Nedashkovskaya et al. 2003, DSM 19835, JCM 11736, KMM 3674, NBRC 101532
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