STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG52429.1Response regulator receiver domain-containing protein. (144 aa)    
Predicted Functional Partners:
SMG52430.1
PAS domain S-box-containing protein.
 
 0.991
SMG52423.1
PAS domain S-box-containing protein.
 
 0.967
SMG52428.1
PAS domain S-box-containing protein.
 
  0.963
SMG26557.1
PAS domain S-box-containing protein.
 
 0.936
SMG12780.1
PAS domain S-box-containing protein.
 
 0.933
SMG48198.1
Predicted ATPase.
 
 
0.929
SMG36392.1
Signal transduction histidine kinase.
 
 0.924
SMG18479.1
PAS domain S-box-containing protein.
 
 0.912
SMG12693.1
PAS domain S-box-containing protein.
 
 0.901
SMG37931.1
PAS domain S-box-containing protein.
 
 0.900
Your Current Organism:
Arenibacter troitsensis
NCBI taxonomy Id: 188872
Other names: A. troitsensis, Arenibacter trinitatis, Arenibacter troitsensis Nedashkovskaya et al. 2003, DSM 19835, JCM 11736, KMM 3674, NBRC 101532
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.