STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSOL_0852Substrate-specific component NikM of nickel ECF transporter / Additional substrate-specific component NikN of nickel ECF transporter. (350 aa)    
Predicted Functional Partners:
DSOL_0851
Transmembrane component NikQ of energizing module of nickel ECF transporter.
 
 0.997
DSOL_0850
ATPase component NikO of energizing module of nickel ECF transporter.
 
 0.991
DSOL_0856
Transmembrane component NikQ of energizing module of nickel ECF transporter.
 0.974
DSOL_4830
Transmembrane component CbiQ of energizing module of cobalt ECF transporter.
 
 0.948
DSOL_4270
Transmembrane component CbiQ of energizing module of cobalt ECF transporter.
 
 0.947
DSOL_0857
ATPase component NikO of energizing module of nickel ECF transporter.
 
 0.942
DSOL_4831
ATPase component CbiO of energizing module of cobalt ECF transporter; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
 0.927
DSOL_4269
ATPase component CbiO of energizing module of cobalt ECF transporter; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
 0.924
DSOL_0842
Transmembrane component CbrV of energizing module of predicted cobalamin ECF transporter.
  
 0.862
DSOL_1705
Transmembrane component BioN of energizing module of biotin ECF transporter.
  
 0.862
Your Current Organism:
Desulfosporosinus sp. OL
NCBI taxonomy Id: 1888891
Other names: D. sp. OL
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