STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSOL_1577Response regulator of zinc sigma-54-dependent two-component system. (577 aa)    
Predicted Functional Partners:
DSOL_0063
RNA polymerase sigma-54 factor RpoN.
 
  
 0.791
DSOL_3845
Sensory box/GGDEF family protein.
    
 0.770
DSOL_2097
Hypothetical protein.
    
 0.750
DSOL_1623
Two-component response regulator.
    
 0.736
DSOL_1061
Two component sensor histidine kinase.
     
 0.639
DSOL_1578
Hypothetical protein.
       0.586
DSOL_1579
Hypothetical protein.
       0.586
DSOL_4853
Sensory box histidine kinase.
     
 0.576
DSOL_1580
RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily.
       0.547
Your Current Organism:
Desulfosporosinus sp. OL
NCBI taxonomy Id: 1888891
Other names: D. sp. OL
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.