STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSOL_3196Hypothetical protein. (163 aa)    
Predicted Functional Partners:
DSOL_2324
Putative membrane protein.
 
 
 0.801
DSOL_0812
Glutamate synthase [NADPH] large chain.
    
 0.795
DSOL_0418
Sulfite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.581
DSOL_2123
Nitrite reductase probable [NAD(P)H] subunit.
  
 
 0.581
iscS
Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.
  
 
  0.558
DSOL_4086
Rieske 2Fe-2S iron-sulfur protein.
    
 0.551
DSOL_3347
Putative glucarate transporter.
  
 
 0.505
DSOL_5413
Site-specific recombinase.
  
     0.497
DSOL_5415
Site-specific recombinase.
  
     0.491
DSOL_3230
Hypothetical protein.
 
     0.475
Your Current Organism:
Desulfosporosinus sp. OL
NCBI taxonomy Id: 1888891
Other names: D. sp. OL
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