Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DSOL_1847 | DSOL_3732 | DSOL_1847 | DSOL_3732 | Cytochrome c-type biogenesis protein ResA. | DNA Helicase. | 0.666 |
DSOL_1847 | DSOL_3734 | DSOL_1847 | DSOL_3734 | Cytochrome c-type biogenesis protein ResA. | Putative ATP /GTP binding protein. | 0.740 |
DSOL_1847 | DSOL_3735 | DSOL_1847 | DSOL_3735 | Cytochrome c-type biogenesis protein ResA. | Hypothetical protein. | 0.744 |
DSOL_2408 | DSOL_3732 | DSOL_2408 | DSOL_3732 | DinG family ATP-dependent helicase YoaA. | DNA Helicase. | 0.777 |
DSOL_2408 | dinG | DSOL_2408 | DSOL_0425 | DinG family ATP-dependent helicase YoaA. | DinG family ATP-dependent helicase YoaA; 3'-5' exonuclease. | 0.522 |
DSOL_2408 | polA | DSOL_2408 | DSOL_1287 | DinG family ATP-dependent helicase YoaA. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.897 |
DSOL_2408 | rpoA | DSOL_2408 | DSOL_1708 | DinG family ATP-dependent helicase YoaA. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.931 |
DSOL_2408 | rpoB | DSOL_2408 | DSOL_1744 | DinG family ATP-dependent helicase YoaA. | DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.922 |
DSOL_2408 | rpoZ | DSOL_2408 | DSOL_0614 | DinG family ATP-dependent helicase YoaA. | DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.936 |
DSOL_3732 | DSOL_1847 | DSOL_3732 | DSOL_1847 | DNA Helicase. | Cytochrome c-type biogenesis protein ResA. | 0.666 |
DSOL_3732 | DSOL_2408 | DSOL_3732 | DSOL_2408 | DNA Helicase. | DinG family ATP-dependent helicase YoaA. | 0.777 |
DSOL_3732 | DSOL_3734 | DSOL_3732 | DSOL_3734 | DNA Helicase. | Putative ATP /GTP binding protein. | 0.846 |
DSOL_3732 | DSOL_3735 | DSOL_3732 | DSOL_3735 | DNA Helicase. | Hypothetical protein. | 0.846 |
DSOL_3732 | DSOL_4361 | DSOL_3732 | DSOL_4361 | DNA Helicase. | Hypothetical protein. | 0.777 |
DSOL_3732 | dinG | DSOL_3732 | DSOL_0425 | DNA Helicase. | DinG family ATP-dependent helicase YoaA; 3'-5' exonuclease. | 0.777 |
DSOL_3732 | polA | DSOL_3732 | DSOL_1287 | DNA Helicase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.798 |
DSOL_3732 | rpoA | DSOL_3732 | DSOL_1708 | DNA Helicase. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.803 |
DSOL_3732 | rpoB | DSOL_3732 | DSOL_1744 | DNA Helicase. | DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.811 |
DSOL_3732 | rpoZ | DSOL_3732 | DSOL_0614 | DNA Helicase. | DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.802 |
DSOL_3734 | DSOL_1847 | DSOL_3734 | DSOL_1847 | Putative ATP /GTP binding protein. | Cytochrome c-type biogenesis protein ResA. | 0.740 |
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